Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934034.1_cds_XP_016480187.1_71657
CDS Infomation

[gene=LOC107801377] [db_xref=GeneID:107801377] [protein=probable transcription factor PosF21] [protein_id=XP_016480187.1] [location=join(21175..22469,22566..22698,22782..22866,23894..24141)] [gbkey=CDS]
Sequence

ATGGGTGGTGACAATGAGGAAGGAAATAGTGATATGGTGCAAAGACTTCAATCATCATTT
GGTACATCATCTTCTTCACTCCCTAAACAACACCAATCTTTATTATCAATGAACCAATTA
GACATACCCCAATTGACTAGTACTTCCCAATTTCGTTGTCAAATGAGGCAGTTTCCCCCC
AATTTTAGTGTTGAAAATAGTACTACTAAAAGAGTAGGCATACCGCCTTCTCACCCACAA
ATGCCCCCTATTTCACCTTACTCTCAGATCCCTGTGACAAGGCCTGTGAATCAGCAAATG
GGAATGCAGAATTTTACTAGTCCAGGGCCATCGCATTCGCGATCTTTATCACAACCGTCG
TTTTTCTCATTGGATTCTTTGCCACCCTTGAGCCCTTCACCGTATAGGGAATCCTCGTCG
ACGTCCATGTCTGACCCTATATCAGCTGATGTGTCAATGGGTGATCAGGATGGCAATTCA
CATTCTTTATTGCCCCCCTCGCCTTTCACGAGGTGTAATTCGTCGAGGGCGGGAGAGAGT
CTTCCTCCTCGTAAGGCTCATAGGCGGTCAAATAGTGATATCCCATTTGGCTTTTCTGCA
ATGATGCAGTCCTCACCACCTCTTGTTCCGTTAAGGAGCCCTGGTTCTCTTGAAAGGTCA
GTTCCTTCAAGGGAAAAACCAATTCAGTTGGTTAAACGGGAAGCTATGTGGGATAAAGGA
AATGATAGCAATGCTGAAGGGATGGGTGAGAGGAAATCTGAAGGAGAAGTTGTGGATGAC
CTGTTTTCCGCGTATATGAACTTGGACAACATTGATGCATTAAACTCTTCTGGGACTGAT
GACAAGCTGGGCAATGAGAACCGTGAAGATTTAGATAGTAGAGCGAGTGGTACAAAGACG
AATGGTGGTGATAGCAGTGATAATGAAGCTACAAGCAGTGTGAATGACAGTGGCAGCAGT
ATGCAGAGGTTAGGGATATCTTCTTCTGTTGAGAAGAAGGAAGGGATCAAAAGGAGTGCT
GTGGGAGATATCGCTCCGACCACAAGGCACTACAGGAGTGTTTCGATGGATAGTTTTATG
GGGAAGTTAAACTTCGTTGATGATTCACCAAAGTTGCCTCCGTCTCCTGGACCGCGCCCA
GGCCAACTCTCACCGACCAGTTCGCTTGATGCAAATTCAAACAGCTTCAGTATGGAATTT
GGAAATGGTGAATTTAGTGGAGCTGAATTGAAGAAAATTATGGCAAATGAGAAACTTGCA
GAGATAGCCTTAGCAGATCCAAAGCGGGCCAAAAGGATTTTAGCCAACCGTCAATCTGCT
GCTCGTTCAAAAGAGCGAAAGATGAGATACATTGCGGAGTTAGAACACAAGGTGCAAACA
CTGCAGACTGAAGCCACCACATTGTCTGCTCAACTGACACTGTTGCAGAGAGATTCTGCT
GGGCTAACGAGCCAAAACCACGAGCTGAAGTTTCGTTTGCAAGCCATGGAGCAGCAAGCT
CAACTCCGTGATGCTCTAAATGAAGCATTAACTGCTGAAGTACAACGGTTGAAGCTTGCA
ACCGCTGAGATAAGTGCAGACGCTGCCAAGTTTCAGCAGCTTTCTCTCAATCCTCAGATG
TTCCAGTTGCAGCAACAGCAGTCAACTCAGCTAAACATGCATCACTTGCAGCAGCAGCAA
CAACAACAATCGTCTCAGCCTCCACAACATGCACAGCAGCAACTTAACAGCTCTACACCT
TCAAAGAATGAATCGAAGTAG

Peptide Sequence

PEP ID

XP_016480187.1
PEP Infomation

PREDICTED: probable transcription factor PosF21 [Nicotiana tabacum]
Sequence

MGGDNEEGNSDMVQRLQSSFGTSSSSLPKQHQSLLSMNQLDIPQLTSTSQFRCQMRQFPP
NFSVENSTTKRVGIPPSHPQMPPISPYSQIPVTRPVNQQMGMQNFTSPGPSHSRSLSQPS
FFSLDSLPPLSPSPYRESSSTSMSDPISADVSMGDQDGNSHSLLPPSPFTRCNSSRAGES
LPPRKAHRRSNSDIPFGFSAMMQSSPPLVPLRSPGSLERSVPSREKPIQLVKREAMWDKG
NDSNAEGMGERKSEGEVVDDLFSAYMNLDNIDALNSSGTDDKLGNENREDLDSRASGTKT
NGGDSSDNEATSSVNDSGSSMQRLGISSSVEKKEGIKRSAVGDIAPTTRHYRSVSMDSFM
GKLNFVDDSPKLPPSPGPRPGQLSPTSSLDANSNSFSMEFGNGEFSGAELKKIMANEKLA
EIALADPKRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQRDSA
GLTSQNHELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATAEISADAAKFQQLSLNPQM
FQLQQQQSTQLNMHHLQQQQQQQSSQPPQHAQQQLNSSTPSKNESK

Transcript Sequence

Gene sequence data has not been registered.